Stem-loop eca-mir-9150

Accession

MI0028373

Description

Equus caballus eca-mir-9150 precursor miRNA

Sequence

148 reads, 6.0 reads per million, 12 experiments

aguugcuguagccuccucccUCUUGGAAACAGCCACUGUAGAAUGaugggccucuaggguucucugucggccaugguuguguucaaggccgagcaacaugcagag
.....(((((.....(((..(((((((.(((((((..((.((..((.((((((...))))))))..)).))..))))))).)))))))..))).....)))))..

Structure

aguug     gccuc   cc       A       CU  A  AU  u      c 
     cugua     cuc  UCUUGGA ACAGCCA  GU GA  Ga gggccu  
     |||||     |||  ||||||| |||||||  || ||  || |||||| u
     gacgu     gag  ggaacuu uguuggu  cg cu  cu cuuggg  
---ga     acaac   cc       g       ac  g  gu  -      a 

Annotation confidence Not enough data

Genome context

15: 29859511-29859615 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-9150

Mature eca-miR-9150-5p

• Accession: MIMAT0034726
• Description: Equus caballus eca-miR-9150-5p mature miRNA
• Sequence: 21 - UCUUGGAAACAGCCACUGUAGAAUG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545