Stem-loop eca-mir-8908a-2

Accession

MI0028361

Description

Equus caballus eca-mir-8908a-2 precursor miRNA

Sequence

68625 reads, 180.0 reads per million, 108 experiments

ugugcagugcccUACCCAGCAAGGUACUGAUCGCuuagacgagguaugAUCAGUGCCUGUCUAGGUGGAguaaugcuca
((.(((.(((.(((((.((..(((((((((((((((.....))))..)))))))))))..)).))))).))).))).))

Structure

  u   g   c     C  CA           --    a 
ug gca ugc cUACC AG  AGGUACUGAUC  GCuu g
|| ||| ||| ||||| ||  |||||||||||  |||| a
ac cgu aug GGUGG UC  UCCGUGACUAg  ugga c
  u   a   A     A  UG           ua    g 

Annotation confidence High

Genome context

X: 119908238-119908316 [-]

Clustered miRNAs

27 other miRNAs are < 10 kb from eca-mir-8908a-2

Mature eca-miR-8908a-5p

• Accession: MIMAT0034713
• Description: Equus caballus eca-miR-8908a-5p mature miRNA
• Sequence: 13 - UACCCAGCAAGGUACUGAUCGC - 34
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8908-3p

• Accession: MIMAT0061137
• Description: Equus caballus eca-miR-8908-3p mature miRNA
• Sequence: 49 - AUCAGUGCCUGUCUAGGUGGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545