Accession
MI0028328
Description
Equus caballus
eca-mir-8908c-1 precursor miRNA
Sequence
62227
reads,
232.0
reads per million, 73 experiments
ggacugggcagauccuccacccugagccaugcuguaugcagugcCCUGCCCAGAAGGUACUUAUCAcuuagccuacguguAAUUAGUACCUGUCCGGGUAGAGUAaugcucaagcagaccaucaauuuuggaggccuucugaccg
......((((((.((((((...(((....((((....(((.(((.((((((.(((((((((...(((.........))).....))))))).)).)))))).))).)))...)))).....)))....))))))...)))).)).
......((((((.((((((...(((....((((....(((.(((.((((((.(((((((((...(((.........))).....))))))).)).)))))).))).)))...)))).....)))....))))))...)))).)).
Structure
ggacug - --u -ccc -gcca guau g C A - --UAU uua
gg caga ccucca uga ugcu gca ugc CUGCCC GA AGGUACU CAc g
|| |||| |||||| ||| |||| ||| ||| |||||| || ||||||| ||| c
cc gucu ggaggu acu acga cgu AUG GAUGGG CU UCCAUGA gug c
-----g a ucc uuua accag -acu a A C G UUAAu cau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
X: 119901185-119901329 [-]
Clustered miRNAs
21 other miRNAs are < 10 kb from eca-mir-8908c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature eca-miR-8908c-5p
| Accession | MIMAT0051558 |
| Description | Equus caballus eca-miR-8908c-5p mature miRNA |
| Sequence | 45 - CCUGCCCAGAAGGUACUUAUCA - 66 |
| Evidence |
experimental
Illumina [1] |
Mature eca-miR-8908c-3p
| Accession | MIMAT0034696 |
| Description | Equus caballus eca-miR-8908c-3p mature miRNA |
| Sequence | 81 - AAUUAGUACCUGUCCGGGUAGAGUA - 105 |
| Evidence |
experimental
Illumina [1] |
References
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