Stem-loop eca-mir-9130

Accession

MI0028313

Description

Equus caballus eca-mir-9130 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

ccccacccugccuuccuggagacuccugcuCUUCCUCUGACAGGUACCCAGAuugaggcugggcuggguggccugcagguggcaggggauggaguggagagagucugcagcucaggcuc
.........((((..(((.((((((((((((((((((((.(((((((((((............)))))).))))).......))))))).)))))))...)))))).)))...))))..

Structure

ccccacccu    -uc   g      ---       -       ------A     -      Auuga 
         gccu   cug agacuc   cugcuCU UCCUCUG       CAGGU ACCCAG     g
         ||||   ||| ||||||   ||||||| |||||||       ||||| ||||||      
         cgga   gac ucugag   ggugagg aggggac       guccg uggguc     g
-------cu    cuc   g      aga       u       gguggac     g      ggguc 

Annotation confidence Not enough data

Genome context

chr13: 19978978-19979096 [+]

Mature eca-miR-9130

• Accession: MIMAT0034681
• Description: Equus caballus eca-miR-9130 mature miRNA
• Sequence: 31 - CUUCCUCUGACAGGUACCCAGA - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545