Stem-loop eca-mir-9122

Accession

MI0028303

Description

Equus caballus eca-mir-9122 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

cccccaccccaccccuccaaggaucugaucucuucucucaggaaggaugauguucuccagugagcccaggggagaUCCUGGACAUCAGGCCUGGCCGAGGgagcaccgaguuccagucuuucccaaggugggaag
.......((((((.....((((((..((.((((((((((.((.(((.((((((.(((....))).((((((....))))))))))))..)))..)))))))))....))).))..)))))).....))))))...

Structure

cccccac      ccucc      cu  u   ----       a  -a   -a      ucuccagugagc      g 
       cccacc     aaggau  ga cuc    uucucuc gg  agg  ugaugu            ccaggg a
       ||||||     ||||||  || |||    ||||||| ||  |||  ||||||            ||||||  
       gggugg     uuucug  cu gag    gagGGAG CC  UCC  ACUACA            GGUCCU g
----gaa      aaccc      ac  u   ccac       -  GG   GG      ------------      a 

Annotation confidence Not enough data

Genome context

chr12: 26329929-26330063 [-]

Mature eca-miR-9122

• Accession: MIMAT0034672
• Description: Equus caballus eca-miR-9122 mature miRNA
• Sequence: 76 - UCCUGGACAUCAGGCCUGGCCGAGG - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545