Stem-loop eca-mir-9120

Accession

MI0028300

Description

Equus caballus eca-mir-9120 precursor miRNA

Sequence

agccuugaggccacaaagggcugucaugcagggaugaagggcggugccuguggguggaugcacuccUCAGUCUCCCUCUCUCUGCAGcucagagcccuggcgcuguggaggagaucc
..((((.((((((....(((((.(..((((((((.((.(((.((...(((.(((((....))).)).))))).)))))))))))))....).))))))))).))...))))......

Structure

----ag    --g  -    caaa     g --ca        u  a   c  ugc   u  -   g 
      ccuu   ag gcca    gggcu u    ugcaggga ga ggg gg   cug gg gug a
      ||||   || ||||    ||||| |    |||||||| || ||| ||   ||| || |||  
      ggag   uc cggu    cccga a    ACGUCUCU CU CCC CU   GAC cc cac u
ccuaga    gug  g    ----     g cucG        -  -   U  ---   U  u   g 

Annotation confidence Not enough data

Genome context

chr12: 33079799-33079915 [+]

Mature eca-miR-9120

• Accession: MIMAT0034669
• Description: Equus caballus eca-miR-9120 mature miRNA
• Sequence: 67 - UCAGUCUCCCUCUCUCUGCAG - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545