Stem-loop eca-mir-9111

Accession

MI0028290

Description

Equus caballus eca-mir-9111 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

guauaugcauuuccauguugccagcaguccuuuccUAGGUGCAUCCGUGGCCCCAGUCCccggcccagcuugcugucccauacucagggcucggucguggaauccgugcgccuuacacgaggguggcaccugg
............(((.((.((((....(((((....((((((((....((......(((.(((((.((((..(((.........))))))).))))).)))..)))))))))).....))))))))))).)))

Structure

guauaugcauuu   u  u    gcag     -uccU        CCGU  CCCCAG   c     c    ug   ucc 
            cca gu gcca    uccuu     AGGUGCAU    GG      UCC cggcc agcu  cug   c
            ||| || ||||    |||||     ||||||||    ||      ||| ||||| ||||  |||   a
            ggu ca cggu    gggag     uccgcgug    cc      agg gcugg ucgg  gac   u
------------   c  -    ----     cacau        ----  ----ua   u     c    --   uca 

Annotation confidence Not enough data

Genome context

chr12: 2512584-2512716 [+]

Mature eca-miR-9111

• Accession: MIMAT0034660
• Description: Equus caballus eca-miR-9111 mature miRNA
• Sequence: 36 - UAGGUGCAUCCGUGGCCCCAGUCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545