Stem-loop eca-mir-9110

Accession

MI0028289

Description

Equus caballus eca-mir-9110 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

cugguuccccucuguacacagaggaggcgguaagcaucuuuccacuggggacuuuggagaaggucagaaggggccUGAAAGAGGGUCUCCGGUGAGGCUUugccacuggggcagaggggaaugguccucagaaca
.(.((((((((((((...(((....((((..((((..((...(((((((((((((.....(((((......))))).....))))))))))))))))))))))).)))..)))))))))))).)...........

Structure

----------c g            aca   agga    gu    au  uuc             ggaga     ag 
           u guuccccucugu   cag    ggcg  aagc  cu   cacuggggacuuu     agguc  a
           | ||||||||||||   |||    ||||  ||||  ||   |||||||||||||     |||||   
           g uaaggggagacg   guc    ccgu  UUCG  GA   GUGGCCUCUGGGA     Uccgg  a
acaagacuccu g            -gg   ---a    --    --  ---             GAAAG     gg 

Annotation confidence Not enough data

Genome context

chr11: 47230233-47230367 [-]

Mature eca-miR-9110

• Accession: MIMAT0034659
• Description: Equus caballus eca-miR-9110 mature miRNA
• Sequence: 76 - UGAAAGAGGGUCUCCGGUGAGGCUU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545