Stem-loop eca-mir-9106

Accession

MI0028283

Description

Equus caballus eca-mir-9106 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

cagaccucaagguguccauucuccuggacuUCACGCGAGGCUCUCGAGGUAGggcugacacucuccccggcccugauucucccucuuucagagccuccguuuuaggaauuacacuguug
..........(((((......(((((((....(((.((((((((.((((((((((((..........))))))))......))))....))))))))))))))))))...)))))....

Structure

cagaccucaa     ccauuc       cuUC   C        ---C    ------        acac 
          ggugu      uccugga    ACG GAGGCUCU    GAGG      UAGggcug    u
          |||||      |||||||    ||| ||||||||    ||||      ||||||||     
          ucaca      aggauuu    ugc cuccgaga    cucc      gucccggc    c
------guug     ---uua       ----   -        cuuu    cucuua        cccu 

Annotation confidence Not enough data

Genome context

chr11: 4187516-4187634 [-]

Mature eca-miR-9106

• Accession: MIMAT0034653
• Description: Equus caballus eca-miR-9106 mature miRNA
• Sequence: 31 - UCACGCGAGGCUCUCGAGGUAG - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545