miRBase entry: eca-mir-9097

Stem-loop eca-mir-9097


Accession
MI0028273
Description
Equus caballus eca-mir-9097 precursor miRNA


Sequence

904 reads, 41.0 reads per million, 101 experiments
aggaagaccagcagcccagcccuccuguccccauccCAGUCCCUGGGGUCUCUCCGAgguauccagcugacacuCCGAAGGGCUGGCAGGGAUUGGGAugggaguggggacauggacgccgguuucagugacc
....(((((.((.(.((((((((.((...((((((((((((((((.(((((.((.(((((.........)).))).)).)))))..)))))))))))))))))).)))).).))).))).)))))........

Structure
----agga     a  a c   - -    c  guc                -G     C  C   -  auc 
        agacc gc g cca g cccu cu   cccauccCAGUCCCUG  GGUCU UC GAg gu   c
        ||||| || | ||| | |||| ||   ||||||||||||||||  ||||| || ||| ||   a
        uuugg cg c ggu c gggg ga   ggguAGGGUUAGGGAC  UCGGG AG Cuc ca   g
ccagugac     c  - a   a a    u  ---                GG     A  C   a  guc 


Annotation confidence High
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Genome context
11: 7308584-7308716 [+]

Database links

Mature eca-miR-9097-5p

Accession MIMAT0051544
Description Equus caballus eca-miR-9097-5p mature miRNA
Sequence 37 - CAGUCCCUGGGGUCUCUCCGA - 57
Evidence experimental
Illumina [1]

Mature eca-miR-9097-3p

Accession MIMAT0034643
Description Equus caballus eca-miR-9097-3p mature miRNA
Sequence 75 - CCGAAGGGCUGGCAGGGAUUGGGA - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545