Stem-loop eca-mir-9084

Accession

MI0028257

Description

Equus caballus eca-mir-9084 precursor miRNA

Sequence

cccgccuagggcuucuccaaucucuuuucugacuuUGUUUUCUCAAAGACUGAUCCUuggggaucccgucagugcuuggagaaacgaagagggugggggaaagagggaagaagauaggcguggcuuccu
((((((((...(((((((..((((((.(((..((((((((.(((.(((((((((....(((...))))))))).))).))))))))))).))).))))))..).))))))....)))))).))......

Structure

------  -      -ggg      - aa      u   ga        U   A   -      CCUu   g 
      cc cgccua    cuucuc c  ucucuu ucu  cuuUGUUU CUC AAG ACUGAU    ggg  
      || ||||||    |||||| |  |||||| |||  |||||||| ||| ||| ||||||    ||| a
      gg gcggau    gaaggg g  aggggg ggg  gaagcaaa gag uuc ugacug    ccc  
uccuuc  u      agaa      a aa      u   -a        -   g   g      ----   u 

Annotation confidence Not enough data

Genome context

chr4: 83795551-83795679 [+]

Mature eca-miR-9084

• Accession: MIMAT0034629
• Description: Equus caballus eca-miR-9084 mature miRNA
• Sequence: 36 - UGUUUUCUCAAAGACUGAUCCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545