Stem-loop eca-mir-9077

Accession

MI0028250

Description

Equus caballus eca-mir-9077 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

gguggaguggaggaggcgugguuuaacuucucccagccucaguuugcucaucuguuaaguggagagagguauaucuaccUCUGAGGGCUUUUGCAGGGAGCAAgggggaggucccgcgugaauguacgucgccaccgucauca
(((((.(((.(....((((((....(((((((((.........((((((.(((((.((((....(((((((....)))))))....))))..)))))))))))))))))))).))))))...).))).)))))..........

Structure

----------     a   g ggag      uuua         agccucagu      a     -u    ggag       u 
          ggugg gug a    gcgugg    acuucuccc         uugcuc ucugu  aagu    agaggua a
          ||||| ||| |    ||||||    |||||||||         |||||| |||||  ||||    |||||||  
          ccgcu cau u    ugcgcc    uggaggggg         AACGAG GGACG  UUCG    UCUccau u
acuacugcca     g   g -aag      ---c         ---------      -     UU    GGAG       c 

Annotation confidence Not enough data

Genome context

chr3: 112567365-112567507 [-]

Mature eca-miR-9077

• Accession: MIMAT0034622
• Description: Equus caballus eca-miR-9077 mature miRNA
• Sequence: 80 - UCUGAGGGCUUUUGCAGGGAGCAA - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545