Stem-loop eca-mir-9067

Accession

MI0028240

Description

Equus caballus eca-mir-9067 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

gggagggcuguugcccauggccacugcacaaggucucagcUACACUCGGGCUGAUCUUUCCAGGCcaggcugaguggagggacagcgacggagagagcucaggcugcacgucggugggcugcuggucagucuuguuccacuguag
((((((((((..(((...(.((((((.((..(((((.((((.(.(((..((((.(((((((((((...)))...))))))))))))....))).))))).)))))....)))))))).)....)))))))))..)))).......

Structure

-------    --      uu   -cau g      c  --aa     c    A A   --GG    A        ---   c 
       ggga  gggcug  gcc    g ccacug ac    ggucu agcU C CUC    GCUG UCUUUCCA   GGC  
       ||||  ||||||  |||    | |||||| ||    ||||| |||| | |||    |||| ||||||||   ||| a
       ccuu  ucugac  ugg    c gguggc ug    ucgga ucga g gag    cgac agggaggu   ucg  
gauguca    gu      --   ucgu g      -  cacg     c    - a   gcag    -        gag   g 

Annotation confidence Not enough data

Genome context

chr2: 34018527-34018671 [+]

Mature eca-miR-9067

• Accession: MIMAT0034612
• Description: Equus caballus eca-miR-9067 mature miRNA
• Sequence: 41 - UACACUCGGGCUGAUCUUUCCAGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545