Stem-loop eca-mir-9059

Accession

MI0028232

Description

Equus caballus eca-mir-9059 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

acgucccuuacccccccacaUCUUAGCAGCAAACAGCAGCCUCUGccauagagguuggugcuacgugcagugggaggucaggggagucugggauggcagacacuu
...((((((..((.(((((......(((.....((.(((((((((...))))))))).)).....))).))))).))..))))))(((((......)))))....

Structure

-----------------acg      ac  c     aUCUUA   GCAAA  G         c 
                    ucccuu  cc cccac      GCA     CA CAGCCUCUG  
                    ||||||  || |||||      |||     || ||||||||| c
                    agggga  gg gggug      cgu     gu guuggagau  
uucacagacgguagggucug      cu  a     -----a   gcauc  g         a 

Annotation confidence Not enough data

Genome context

chr2: 23588281-23588385 [-]

Mature eca-miR-9059

• Accession: MIMAT0034604
• Description: Equus caballus eca-miR-9059 mature miRNA
• Sequence: 21 - UCUUAGCAGCAAACAGCAGCCUCUG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545