Stem-loop eca-mir-9055

Accession

MI0028226

Description

Equus caballus eca-mir-9055 precursor miRNA

Sequence

11137 reads, 40.0 reads per million, 173 experiments

augggcaguguccugAGAGAGCACCAAGGGAGCUGCGUggggcuauuuaucacAGCGUCCCUCCGUGCUGUCCCAuggcuuggaaccaaaa
.(((.(((.(((.((.((.(((((..(((((((((.(((((....)))).).)))).)))))..))))).)).)).))))))...)))...

Structure

--a   --g   u   c  A  G     CA     -    C -    g 
   ugg   cag guc ug GA AGCAC  AGGGA GCUG G Uggg c
   |||   ||| ||| || || |||||  ||||| |||| | ||||  
   acc   guu cgg AC CU UCGUG  UCCCU CGAc c auuu u
aaa   aag   -   u  C  G     CC     G    a u    a 

Annotation confidence High

Genome context

1: 93687645-93687735 [+]

Mature eca-miR-9055-5p

• Accession: MIMAT0034599
• Description: Equus caballus eca-miR-9055-5p mature miRNA
• Sequence: 16 - AGAGAGCACCAAGGGAGCUGCGU - 38
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9055-3p

• Accession: MIMAT0051538
• Description: Equus caballus eca-miR-9055-3p mature miRNA
• Sequence: 54 - AGCGUCCCUCCGUGCUGUCCCA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545