Stem-loop eca-mir-9048

Accession

MI0028216

Description

Equus caballus eca-mir-9048 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

cggcccuccguaucugugagcucugcaucugcgggauucaaccaaccgcggaucguguauguacugugguuaCCAUCUGCAGUUGGCUGAGCCCacgggugcagaauccaccaauacagaggaccuagu
.((.((((.((((..(((...((((((((((.(((.((((.(((((.((((((.(((.((........))))).)))))).))))).))))))).))))))))))...)))..)))).)))).))....

Structure

---c  c    c    cu   agc          c   a    a     c      c   u  gua 
    gg ccuc guau  gug   ucugcaucug ggg uuca ccaac gcggau gug au   c
    || |||| ||||  |||   |||||||||| ||| |||| ||||| |||||| ||| ||    
    cc ggag caua  cac   agacgugggc CCC GAGU GGUUG CGUCUA Cau ug   u
ugau  a    a    ac   cua          a   -    C     A      C   -  gug 

Annotation confidence Not enough data

Genome context

chr1: 40605640-40605768 [-]

Mature eca-miR-9048

• Accession: MIMAT0034592
• Description: Equus caballus eca-miR-9048 mature miRNA
• Sequence: 73 - CCAUCUGCAGUUGGCUGAGCCC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545