Stem-loop eca-mir-7667

Accession

MI0028208

Description

Equus caballus eca-mir-7667 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gcucuguuuccugagagaaacaggaaaguccuaccacugucguccucggagaccauggagcuaggccuCAGGGACAGGAGAGAUGGAGGCUggcucucggggcgcagggcugaguggcaga
(((((((.(((((((((...(((......(((.(((((.(((((((..(((.((.........)).))).)))))..)).)).))))))))).))))))))).)))))))...........

Structure

-----------       u         aaa   gaaagu   a   -  g  --     cg   a  aug 
           gcucugu uccugagag   cag      ccu cca cu uc  guccu  gag cc   g
           ||||||| |||||||||   |||      ||| ||| || ||  |||||  ||| ||   a
           cgggacg ggggcucuc   gUC      GGA GGU GA AG  CAGGG  Cuc gg   g
agacggugagu       c         --g   ------   -   A  G  GA     -A   c  auc 

Annotation confidence Not enough data

Genome context

chr25: 4326460-4326580 [+]

Mature eca-miR-7667

• Accession: MIMAT0034585
• Description: Equus caballus eca-miR-7667 mature miRNA
• Sequence: 69 - CAGGGACAGGAGAGAUGGAGGCU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545