Stem-loop eca-mir-9034

Accession

MI0028198

Description

Equus caballus eca-mir-9034 precursor miRNA

Sequence

1032 reads, 16.0 reads per million, 88 experiments

ggccaggugguUAAGUUCAUGUGCUCUGCUUCgguagccugggguuuauggguucagaugcuggguguggaccuacacaccacucauuaagccguacuguggcagugucccacaUAGAAGAACUAGAAUGACCUacaacuagg
....((((.(((.(((((((((((.(((((.((((.....(.(((((((((((.(((...)))((((((......))))))))))).)))))).))))).))))).)...)))))....)))))..))).)))).........

Structure

-----ggcc    g   -A     ----     --- U     U    agccu g      -     ucagaugcug      ga 
         aggu guU  AGUUC    AUGUG   C CUGCU Cggu     g gguuua ugggu          ggugug  c
         |||| |||  |||||    |||||   | ||||| ||||     | |||||| |||||          ||||||   
         UCCA UAA  UCAAG    Uacac   g gacgg guca     u ccgaau acuca          ccacac  c
ggaucaaca    G   GA     AAGA     ccu u     u    ----- g      u     ----------      au 

Annotation confidence Low

Genome context

25: 39833980-39834122 [+]

Mature eca-miR-9034-5p

• Accession: MIMAT0051531
• Description: Equus caballus eca-miR-9034-5p mature miRNA
• Sequence: 12 - UAAGUUCAUGUGCUCUGCUUC - 32
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9034-3p

• Accession: MIMAT0034576
• Description: Equus caballus eca-miR-9034-3p mature miRNA
• Sequence: 115 - UAGAAGAACUAGAAUGACCU - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545