Stem-loop eca-mir-9021

Accession

MI0028184

Description

Equus caballus eca-mir-9021 precursor miRNA

Literature search

1 open access papers mention eca-mir-9021
(1 sentences)

Sequence

122 reads, 18 reads per million, 1 experiments

uccuccuucaguuucuccagaagcugagagugggcagccccuggccugcagagguuagaguaacCUGCUGCCGAGAGUUGUUCACUGUcuccuucugacguguccucgagacu
.................((((((..((.((((((((((.(.((((..(((..(((((...)))))))).)))).).)))))))))).))..))))))..((.((...)).)).

Structure

uccuccuucaguuucuc      cu  g          c c    cu   ga     g 
                 cagaag  ga agugggcagc c uggc  gca  gguua  
                 ||||||  || |||||||||| | ||||  |||  ||||| a
                 gucuuc  cU UCACUUGUUG G GCCG  CGU  Ccaau  
-ucagagcuccugugca      cu  G          A A    -U   --     g 

Annotation confidence Not enough data

Genome context

chr28: 45276597-45276709 [-]

Mature eca-miR-9021

• Accession: MIMAT0034562
• Description: Equus caballus eca-miR-9021 mature miRNA
• Sequence: 65 - CUGCUGCCGAGAGUUGUUCACUGU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545