Stem-loop eca-mir-9014-1

Accession

MI0028176

Description

Equus caballus eca-mir-9014-1 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

ccgugguuuggaguguggucaggagccauagggagggauaccaauccagccuuaggaaaagaaaccugccacaggagUCUUGGAGAUUGGUGACCGUCCuaaugacuuaaguggucaaccacugcccauguaaaauuua
.(((((...(.((((((((((.(((.(((.((((.((.((((((((...((.......((((..((((...))))..)))))).)))))))).)).)))).))).)))...))))))..)))).)))))).........

Structure

--------c     uuu g    --      --g   c   a    g  a        cag  uuaggaa    aa    c 
         cgugg   g agug  ugguca   gag cau ggga gg uaccaauc   cc       aaga  ccug  
         |||||   | ||||  ||||||   ||| ||| |||| || ||||||||   ||       ||||  |||| c
         guacc   c ucac  acuggu   uuc gua uCCU CC GUGGUUAG   GG       UUCU  ggac  
auuuaaaau     --- g    ca      gaa   a   a    G  A        --A  -------    ga    a 

Annotation confidence Not enough data

Genome context

chr8: 5879610-5879748 [-]

Mature eca-miR-9014

• Accession: MIMAT0034555
• Description: Equus caballus eca-miR-9014 mature miRNA
• Sequence: 78 - UCUUGGAGAUUGGUGACCGUCC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545