Stem-loop eca-mir-9011

Accession

MI0028173

Description

Equus caballus eca-mir-9011 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

aggccguguggugggaggcgaggguggucaggacugccgucgacagggcgacccacuuugggcuccgagaaucugcucaUUCAAGGUCGCUUUGGUGGGGGCAgggcgacagccgccccucggcccaggggagcagugagggc
...((.((.(((..((((.(..(((.(((.(..(((((.((..((((((((((.....(((((...........))))).....))))))))))..)).)))))..)))).)))..))))).))))).)).............

Structure

----------agg  g  u   gg    c ag   g   a ga     g  ga          cacuu     uccg 
             cc ug ggu  gagg g  ggu guc g  cugcc uc  cagggcgacc     ugggc    a
             || || |||  |||| |  ||| ||| |  ||||| ||  ||||||||||     |||||    g
             gg ac ccg  cucc c  ccg cag c  gACGG GG  GUUUCGCUGG     acucg    a
cgggagugacgag  g  -   -g    - cg   a   - gg     G  UG          AACUU     ucua 

Annotation confidence Not enough data

Genome context

chr8: 20966149-20966291 [-]

Mature eca-miR-9011

• Accession: MIMAT0034552
• Description: Equus caballus eca-miR-9011 mature miRNA
• Sequence: 80 - UUCAAGGUCGCUUUGGUGGGGGCA - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545