Stem-loop eca-mir-8991

Accession

MI0028147

Description

Equus caballus eca-mir-8991 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ugccaguggccccgugcagaccugcggggcccugacagacgaggacaucgucaggcugcggcccugugagaagaggcgggUACGUGUCACAGGUUCCUUGCUGAGgacgcuagcagugcggggggcagagagagcuggacacaca
(((((((.(((((.((((...((((((.(.(((..(((.((((((.(((....(((.(((..(((((........)))))..))))))...))))))))))))))).).)).)))))))).))))).......))))).))....

Structure

----  -     ------g     g    gac    -  g c   ga   a      c   guca   u   gc     gag 
    ug ccagu       gcccc ugca   cugc gg g ccu  cag cgagga auc    ggc gcg  ccugu   a
    || |||||       ||||| ||||   |||| || | |||  ||| |||||| |||    ||| |||  |||||    
    ac ggucg       cgggg gcgu   gacg uc c gGA  GUC GUUCCU UGG    CUG UGC  gggcg   a
acac  a     agagaga     g    ---    a  g a   --   -      -   -ACA   -   AU     gag 

Annotation confidence Not enough data

Genome context

chr7: 3528323-3528467 [-]

Mature eca-miR-8991

• Accession: MIMAT0034528
• Description: Equus caballus eca-miR-8991 mature miRNA
• Sequence: 81 - UACGUGUCACAGGUUCCUUGCUGAG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545