Stem-loop eca-mir-8985

Accession

MI0028141

Description

Equus caballus eca-mir-8985 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

ggcccaguucaacguggacgucaggggagcaccgggugguUACUUUUUGGUCUGAGUGCGUCCcacacgacauugagacacacucacacuaaaagggaucggccggcggccugagcucacgcguagcgggcgugcuuuauu
.((((.(((..(((((((..(((((......((((.(((((.(((((((((.((((((.(((.((........)).))).)))))).)))))))))))))).))))...)))))..)).))))))))))))..........

Structure

---------g    a   ca     -  cg     ggagca    g     A         C      C   C  cac 
          gccc guu  acgug ga  ucagg      ccgg ugguU CUUUUUGGU UGAGUG GUC ca   g
          |||| |||  ||||| ||  |||||      |||| ||||| ||||||||| |||||| ||| ||    
          cggg cga  ugcgc cu  agucc      ggcc gcuag ggaaaauca acucac cag gu   a
uuauuucgug    -   --     a  cg     ---ggc    g     -         c      a   a  uac 

Annotation confidence Not enough data

Genome context

chr7: 402942-403082 [+]

Mature eca-miR-8985

• Accession: MIMAT0034522
• Description: Equus caballus eca-miR-8985 mature miRNA
• Sequence: 41 - UACUUUUUGGUCUGAGUGCGUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545