Stem-loop eca-mir-8978

Accession

MI0028134

Description

Equus caballus eca-mir-8978 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

agggcucgggacguccggggcugggaaggggagguggacgUGAUAGAGACGGGGCGGACCAGGUGcgcggaucucggccucgcgcccucaucgcucgucuuugggguuuccgcccacaugcgcugggacaauucucggucgaagg
..(((.(((((.((((.((((.......(((.((.((((....((((((((((.(((....((((((.((.......)).))))))....)))))))))))))..)))))).)))....)).)).))))...)))))))).....

Structure

---ag   u     --c    g  -  ugggaag   a  u    gUGA          G   ACCA      c  au 
     ggc cggga   gucc gg gc       ggg gg ggac    UAGAGACGGG CGG    GGUGcg gg  c
     ||| |||||   |||| || ||       ||| || ||||    |||||||||| |||    |||||| ||  u
     cug gcucu   cagg uc cg       ccc cc uuug    guuucugcuc gcu    ccgcgc cc  c
ggaag   -     uaa    g  g  ---uaca   g  -    --gg          -   acuc      u  gg 

Annotation confidence Not enough data

Genome context

chr6: 18961502-18961646 [+]

Mature eca-miR-8978

• Accession: MIMAT0034515
• Description: Equus caballus eca-miR-8978 mature miRNA
• Sequence: 41 - UGAUAGAGACGGGGCGGACCAGGUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545