Stem-loop eca-mir-8974

Accession

MI0028130

Description

Equus caballus eca-mir-8974 precursor miRNA

Sequence

9 reads, 1 reads per million, 1 experiments

ggucguuccgugcuugggugaaugucuuuguguccuaacaCUCAAGAUCAGCACACUGUGUUgacugccuggcacaguacagguguuauuucaggugaggaaacagagauuuagagaaacuaaguacacagcaaguuac
((.....))((((((((......((((((((.((((..((((..((((.(((((.((((((((..(((...))))))))))))))))))))..)))))))).)))))))).........))))))))............

Structure

---ggucguucc        ---gugaau        g    aa    CA    C     A        ac   c 
            gugcuugg         gucuuugu uccu  caCU  AGAU AGCAC CUGUGUUg  ugc  
            ||||||||         |||||||| ||||  ||||  |||| ||||| ||||||||  ||| u
            caugaauc         uagagaca agga  gugg  uuua uugug gacaugac  acg  
cauugaacgaca        aaagagauu        a    --    ac    -     -        --   g 

Annotation confidence Not enough data

Genome context

chr6: 18872578-18872716 [-]

Mature eca-miR-8974

• Accession: MIMAT0034511
• Description: Equus caballus eca-miR-8974 mature miRNA
• Sequence: 41 - CUCAAGAUCAGCACACUGUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545