Stem-loop eca-mir-8962

Accession

MI0028116

Description

Equus caballus eca-mir-8962 precursor miRNA

Sequence

cagcggcggcguggagcugggcugcacucugcacuuuucugacuccccagggagcuguUAGCAAGGCUGCAGACAUUCCAGccaugcagggcuggccuucc
((((....(((((..((((((.((...((((((((((.((((((((....)))...))))).)))).)))))))).)))))))))))...)))).......

Structure

-------    ggcg     ga      c  cac      -    u     ---   c 
       cagc    gcgug  gcuggg ug   ucugca cuuu cugac   ucc c
       ||||    |||||  |||||| ||   |||||| |||| |||||   |||  
       gucg    cguac  cGACCU AC   AGACGU GGAA GAUug   agg a
ccuuccg    -gga     --      U  ---      C    C     ucg   g 

Annotation confidence Not enough data

Genome context

chr22: 23398089-23398189 [-]

Mature eca-miR-8962

• Accession: MIMAT0034497
• Description: Equus caballus eca-miR-8962 mature miRNA
• Sequence: 59 - UAGCAAGGCUGCAGACAUUCCAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545