Stem-loop eca-mir-8951

Accession

MI0028098

Description

Equus caballus eca-mir-8951 precursor miRNA

Sequence

4345 reads, 7.0 reads per million, 134 experiments

ugaacuggcccagaacauaauugaauccauguuguUUUUUGAAGACAUUCCUAGAAUCCagugaguuguuuuaaucugaUUCUAAGAAUGUCUUCAAAAACaacauggauucucuugcacaaauucuaagaau
.(((.((((..(((........(((((((((((((((((.((((((((((.(((((((...((((....))))....))))))).)))))))))))))))))))))))))))))).)).))..))).......

Structure

------u   -c  -  cc   acauaauu                 U          C       -Cag    u 
       gaa  ug gc  aga        gaauccauguuguUUUU GAAGACAUUC UAGAAUC    ugag u
       |||  || ||  |||        ||||||||||||||||| |||||||||| |||||||    ||||  
       cuu  ac cg  ucu        cuuagguacaaCAAAAA CUUCUGUAAG AUCUUag    auuu g
uaagaau   aa  a  -u   --------                 -          A       ucua    u 

Annotation confidence High

Genome context

23: 18491976-18492108 [+]

Mature eca-miR-8951-5p

• Accession: MIMAT0034480
• Description: Equus caballus eca-miR-8951-5p mature miRNA
• Sequence: 36 - UUUUUGAAGACAUUCCUAGAAUCC - 59
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8951-3p

• Accession: MIMAT0051511
• Description: Equus caballus eca-miR-8951-3p mature miRNA
• Sequence: 80 - UUCUAAGAAUGUCUUCAAAAAC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545