Stem-loop eca-mir-8944

Accession

MI0028090

Description

Equus caballus eca-mir-8944 precursor miRNA

Sequence

4 reads, 1 reads per million, 1 experiments

guuuccuugggaggucaacagucacgcaucagauuuccagggaagugccccgagaggggagugggUUGGAGCUGAGCUUGGCUGUCACCCcagggaaaggagggcugaacauugc
.((((((((((..(...(((((((.((.((((..((((((...(.(.((((....))))).)...)))))))))))).))))))))..)))))))))).................

Structure

----------------g          ag uca       c  a    au      gga g g    g 
                 uuuccuuggg  g   acaguca gc ucag  uuccag   a u cccc a
                 ||||||||||  |   ||||||| || ||||  ||||||   | | ||||  
                 aaagggacCC  C   UGUCGGU CG AGUC  GAGGUU   u a gggg g
cguuacaagucgggagg          CA ---       U  -    --      ggg g -    a 

Annotation confidence Not enough data

Genome context

NW_001868579.1: 29250-29364 [-]

Mature eca-miR-8944

• Accession: MIMAT0034473
• Description: Equus caballus eca-miR-8944 mature miRNA
• Sequence: 66 - UUGGAGCUGAGCUUGGCUGUCACCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545