Stem-loop eca-mir-8942

Accession

MI0028086

Description

Equus caballus eca-mir-8942 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

cugaaaaguucuccugcuccgggucucaggacucugcuggccaggccaaggcgggagucUAGGCUUUAGGAGAGCUGAccgcgggguuggagcuccaggauuc
(((...((((((...((((((((((...((.((((.(((...(((((.((((....)))).)))))))).)))))))))).)))))).)))))).))).....

Structure

-----   aaa      ccu      -    uca  a    g   gcc     a    g 
     cug   aguucu   gcuccg gguc   gg cucu cug   aggcc aggc g
     |||   ||||||   |||||| ||||   || |||| |||   ||||| ||||  
     gac   ucgagg   uggggc ccAG   UC GAGA GAU   UUCGG Ucug g
cuuag   --c      --u      g    ---  -    G   ---     A    a 

Annotation confidence Not enough data

Genome context

NW_001869118.1: 41328-41430 [-]

Mature eca-miR-8942

• Accession: MIMAT0034471
• Description: Equus caballus eca-miR-8942 mature miRNA
• Sequence: 60 - UAGGCUUUAGGAGAGCUGA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545