Stem-loop eca-mir-8934-1

Accession

MI0028072

Description

Equus caballus eca-mir-8934-1 precursor miRNA

Sequence

24 reads, 4 reads per million, 1 experiments

ugguccccaugaaaacgggcagccaagguggcucggggggCCCCUGGAGGCCUCUGUACCCCACUugagaaaggguggcaguggggcagcaggcuuggggcccccagggcuccaccguuccugcuuugggaccugagaggugcac
.((((((.........((((((....((((((((.(((((((((...(((((((((..((((((((.(.......).).)))))))))).))))))))))))))).))))..))))....)))))).))))))............

Structure

-----------u      caugaaaac      ccaa    --    g         UGG      -   UA       - g ga 
            gguccc         gggcag    ggug  gcuc gggggCCCC   AGGCCU CUG  CCCCACU u a  a
            ||||||         ||||||    ||||  |||| |||||||||   |||||| |||  ||||||| | |  a
            ccaggg         uucguc    ccac  cggg cccccgggg   uucgga gac  gggguga g u  g
cacguggagagu      --------u      cuug    cu    a         ---      c   --       c g gg 

Annotation confidence Not enough data

Genome context

NW_001867853.1: 194530-194674 [-]

Mature eca-miR-8934

• Accession: MIMAT0034463
• Description: Equus caballus eca-miR-8934 mature miRNA
• Sequence: 41 - CCCCUGGAGGCCUCUGUACCCCACU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545