Stem-loop eca-mir-8928

Accession

MI0028063

Description

Equus caballus eca-mir-8928 precursor miRNA

Sequence

13 reads, 2 reads per million, 1 experiments

cgagcgugcgcgugguucucccgucgcgugcugggguggggagagaggcccggccuguccgggCUCCGCCCCGCCGCGAGCGGCUGaccuauccgcucaguucucauccug
.((((..(((.((((.((..((((((((.((.(((((((.......(((((((.....))))))))))))))))))))).)))..)).)))).)))...))))........

Structure

-------c    -gu   c    u  uc   -     u  u       ggagaga       c 
        gagc   gcg gugg uc  ccg ucgcg gc ggggugg       ggcccgg c
        ||||   ||| |||| ||  ||| ||||| || |||||||       ||||||| u
        cuug   cgc uauc aG  GGC AGCGC CG CCCCGCC       UCgggcc g
guccuacu    acu   c    c  UC   G     -  -       -------       u 

Annotation confidence Not enough data

Genome context

NW_001870427.1: 28781-28891 [-]

Mature eca-miR-8928

• Accession: MIMAT0034456
• Description: Equus caballus eca-miR-8928 mature miRNA
• Sequence: 64 - CUCCGCCCCGCCGCGAGCGGCUG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545