Stem-loop eca-mir-8926

Accession

MI0028061

Description

Equus caballus eca-mir-8926 precursor miRNA

Sequence

15 reads, 2 reads per million, 1 experiments

agccagcagugucaccugagcuguaucucuugggcAGAAAGAUCAGAAGGUACACGGGCccuacaaacauuugggaucauaucuaagaaaucugaauuuaguugccagcuggggccgcugcugggaaaggaca
..(((((((((...(((.((((..........(((((..(((((((((((((...(..(((...........)))..).)))))......)))).))))..))))))))).))).))))))))).........

Structure

-------ag         uca   g    guaucucuug     AA    -    ------     CAC GG   uaca 
         ccagcagug   ccu agcu          ggcAG  AGAU CAGA      AGGUA   G  Ccc    a
         |||||||||   ||| ||||          |||||  |||| ||||      |||||   |  |||    a
         ggucgucgc   ggg ucga          ccguu  uuua gucu      ucuau   c  ggg    c
acaggaaag         --c   g    ----------     ga    a    aaagaa     --a ua   uuua 

Annotation confidence Not enough data

Genome context

NW_001867699.1: 22793-22925 [+]

Mature eca-miR-8926

• Accession: MIMAT0034454
• Description: Equus caballus eca-miR-8926 mature miRNA
• Sequence: 36 - AGAAAGAUCAGAAGGUACACGGGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545