Stem-loop eca-mir-8914

Accession

MI0028049

Description

Equus caballus eca-mir-8914 precursor miRNA

Sequence

1892 reads, 6.0 reads per million, 131 experiments

gggugaagaagcggagcucucgggacagaaggccaggcuuUUUGAGCUGUGUUGGUUGUCACGguuccuguuucgUGAACCACAAGCAGCUCAACAAacuguggucuguguucucuccuaaaacccuuugcacuucccacu
.((.((((..((((((.....((((.(((((((((.(.((((((((((((..((((..((((((........))))))))))...))))))))).))).).))))))....))).))))......)))))).))))))...

Structure

--g  u    aa      -cucuc    c   ----      g c   -         -GU    UG      uuc 
   gg gaag  gcggag      ggga aga    aggcca g uuU UUGAGCUGU   UGGU  UCACGg   c
   || ||||  ||||||      |||| |||    |||||| | ||| |||||||||   ||||  ||||||    
   cc cuuc  cguuuc      uccu ucu    ucuggu u aAA AACUCGACG   ACCA  AGUgcu   u
uca  -    -a      ccaaaa    c   ugug      g c   C         AAC    --      uug 

Annotation confidence High

Genome context

20: 16061832-16061972 [-]

Mature eca-miR-8914-5p

• Accession: MIMAT0034442
• Description: Equus caballus eca-miR-8914-5p mature miRNA
• Sequence: 41 - UUUGAGCUGUGUUGGUUGUCACG - 63
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8914-3p

• Accession: MIMAT0051502
• Description: Equus caballus eca-miR-8914-3p mature miRNA
• Sequence: 76 - UGAACCACAAGCAGCUCAACAA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545