Stem-loop eca-mir-8911

Accession

MI0028046

Description

Equus caballus eca-mir-8911 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

gucguggaaagcaggguggcaaaguaggggugcacauucugcuuuggcggcugggguuccaccaauuuggauCCUGGAUGUGGACGUAGGCACCgcuugucaagccaugcugcggcaggcaucccacau
(((.((....((((.(((((.....((.(((((.....((((.((.(((.(((((((.(((......)))))))))).))).)).))))))))).))......))))).))))..))))).........

Structure

---------   g  gaaa    g     -aaagu  g     acauu    u  g   g       u   cc 
         guc ug    gcag guggc      ag ggugc     cugc uu gcg cuggggu cca  a
         ||| ||    |||| |||||      || |||||     |||| || ||| ||||||| |||   
         cgg ac    cguc uaccg      uc CCACG     GAUG AG UGU GGUCCua ggu  a
uacacccua   -  --gg    g     aacugu  g     -----    C  G   A       -   uu 

Annotation confidence Not enough data

Genome context

chr20: 23645241-23645369 [+]

Mature eca-miR-8911

• Accession: MIMAT0034439
• Description: Equus caballus eca-miR-8911 mature miRNA
• Sequence: 73 - CCUGGAUGUGGACGUAGGCACC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545