Stem-loop cfa-mir-8905

Accession

MI0028043

Description

Canis familiaris cfa-mir-8905 precursor miRNA

Sequence

ugucucucucuggccguccggggcgacgagagaacuaccaUCCACAAAGAGGAUUCGGUCAGGCUucgggagggcuugauaggaaagucccgacguggaggagucagcucgugcaggaguugagggcaggaaugggaggguucug
(((((((((((.(((......))).).))))))(((.((.(((((...(.((((((.(((((((((.....)))))))))..))..)))))...))))))))))((((((......))))))..))))(((((......))))).

Structure

-----------------    ucucucuggccguccggggcgacgagaga   a  a     AAA A    --  -G         c 
                 uguc                             acu cc UCCAC   G GGAU  UC  GUCAGGCUu g
                 ||||                             ||| || |||||   | ||||  ||  ||||||||| g
                 acgg                             uga gg aggug   c ccug  ag  uaguucggg g
gucuugggaggguaagg    ---------gaguugaggacgugcucgac   -  -     cag -    aa  ga         a 

Annotation confidence Not enough data

Genome context

chr26: 28860341-28860485 [+]

Mature cfa-miR-8905

• Accession: MIMAT0034436
• Description: Canis familiaris cfa-miR-8905 mature miRNA
• Sequence: 41 - UCCACAAAGAGGAUUCGGUCAGGCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545