Stem-loop cfa-mir-8834b

Accession

MI0028033

Description

Canis familiaris cfa-mir-8834b precursor miRNA

Sequence

acacuacuggcggcagccagcucuccagcucuggagucagcucccgcaguaacuaccgaagcuuccaguucgcgcuggccUGGAUGCUCAGUCAGCGGGGGUGCUgaacugcacagcuugggggcaccugguggcaggagcgucc
......(((((....)))))..((((((((.((.(((((((((((((....(((...((.((.(((((...((....))))))).)))))))..))))))..)))).))).)).))).)))))((.((((....)))).))....

Structure

acacuacuggcggcagccagcu     -   c  g   -    --      agua   acc  a  u     uuc  g 
                      cucca gcu ug agu cagc  ucccgc    acu   ga gc uccag   gc c
                      ||||| ||| || ||| ||||  ||||||    |||   || || |||||   ||  
                      ggggu cga ac uca gUCG  GGGGCG    UGA   CU CG AGGUc   cg u
ccugcgaggacggugguccacg     u   c  g   a    UG      --AC   ---  -  U     ---  g 

Annotation confidence Not enough data

Genome context

chrX: 47487713-47487857 [+]

Mature cfa-miR-8834b

• Accession: MIMAT0034431
• Description: Canis familiaris cfa-miR-8834b mature miRNA
• Sequence: 81 - UGGAUGCUCAGUCAGCGGGGGUGCU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545