Stem-loop cfa-mir-8908d-2

Accession

MI0028021

Description

Canis familiaris cfa-mir-8908d-2 precursor miRNA

Sequence

ucugcaggccacgcugaguuuggggcccuacccagaaaggugcugaugaggcaggauacagauuAUUAGCGCCUGACUGAGUGGGGUCccaaucaguaacagaacugcccgug
...((((..(..(((((..((((((((((((.(((..((((((((((((....(....)...))))))))))))..))).)))))))))))))))))....)..)))).....

Structure

--ucu    gc --ac     gu            c   aa            ggca g 
     gcag  c    gcuga  uuggggcccuac cag  aggugcugauga    g a
     ||||  |    |||||  |||||||||||| |||  ||||||||||||    |  
     cguc  g    ugacu  aaccCUGGGGUG GUC  UCCGCGAUUAuu    c u
gugcc    aa acaa     --            A   AG            -aga a 

Annotation confidence Not enough data

Genome context

chrX: 114679949-114680061 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from cfa-mir-8908d-2

Mature cfa-miR-8908d

• Accession: MIMAT0034420
• Description: Canis familiaris cfa-miR-8908d mature miRNA
• Sequence: 65 - AUUAGCGCCUGACUGAGUGGGGUC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545