Stem-loop cfa-mir-1296

Accession

MI0028014

Description

Canis familiaris cfa-mir-1296 precursor miRNA

Sequence

ugaaaucagcgaauaaccuaccuaacuggaUUAGGGCCCUGGCUCCAUCUCCUUUaggaaaaccuucuguggggaguggggcuuugacccuaacccagcugggcuguaacacugcugcauuuucu
.((((((((((......(..((((.((((.((((((....(((((((.((((((..((((....))))..)))))))))))))....)))))).)))).))))..)......))))).)))))..

Structure

-u     -     aauaac ua    a    a      CCCU       U      Ua    a 
  gaaau cagcg      c  ccua cugg UUAGGG    GGCUCCA CUCCUU  ggaa a
  ||||| |||||      |  |||| |||| ||||||    ||||||| ||||||  ||||  
  uuuua gucgu      g  gggu gacc aauccc    ucggggu gagggg  ucuu c
uc     c     cacaau uc    c    c      aguu       -      ug    c 

Annotation confidence Not enough data

Genome context

chr4: 15180088-15180212 [-]

Mature cfa-miR-1296

• Accession: MIMAT0034413
• Description: Canis familiaris cfa-miR-1296 mature miRNA
• Sequence: 31 - UUAGGGCCCUGGCUCCAUCUCCUUU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545