Stem-loop cfa-mir-8881

Accession

MI0027978

Description

Canis lupus familiaris cfa-mir-8881 precursor miRNA

Sequence

33 reads, 2.0 reads per million, 13 experiments

auggcuuuguguuuggaccugcccuagguauuugagguaggggucugaccuguguacugcucauaacugggccugucaUUUGUUUUCUCUGGUUCUGUACCugugauugguuucaaagauagagcugguaaguuucuguuc
..((((((((.((((((((...(.(((((((..(((.((((((...(((..(((.((.(((((....)))))..)))))..))).)))))).))).))))))).)...)).)))))).))))))))...............

Structure

-------------au        g      -  ugc c       uu   g      ucu   cu   u  -u     u 
               ggcuuugu uuugga cc   c uagguau  gag uagggg   gac  gug ac  gcuca a
               |||||||| |||||| ||   | |||||||  ||| ||||||   |||  ||| ||  |||||  
               ucgagaua aaacuu gg   g guCCAUG  CUU GUCUCU   UUG  Uac ug  cgggu a
cuugucuuugaaugg        g      u  uua u       -U   G      --U   UU   -  uc     c 

Annotation confidence Not enough data

Genome context

7: 37320774-37320914 [+]

Mature cfa-miR-8881-3p

• Accession: MIMAT0034381
• Description: Canis lupus familiaris cfa-miR-8881-3p mature miRNA
• Sequence: 79 - UUUGUUUUCUCUGGUUCUGUACC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545