Stem-loop cfa-mir-8855

Accession

MI0027946

Description

Canis familiaris cfa-mir-8855 precursor miRNA

Sequence

ggccggcguuuggcuaguaaauccaguggcgugcgucuugacaguagguagcauccgauaccccgugagaccuugcugggCUUAGGGUUCUGUGUUUCCUGUGGCcaaggcugccagggucggguuguugaacgcuagcauucug
.((.((((((((((......((((..(((((...((((((.((.((((.(((((..((.((((..((((.(((....))))))))))))).))))).))))))..)))))))))))))))......)))))))))).))......

Structure

-----g  c          uaguaa    ag     ugc      -a  g    u     cc  u    cg    a   u 
      gc ggcguuuggc      aucc  uggcg   gucuug  ca uagg agcau  ga accc  ugag ccu g
      || ||||||||||      ||||  |||||   ||||||  || |||| |||||  || ||||  |||| |||  
      cg ucgcaaguug      uggg  accgu   cggaac  GU GUCC UUGUG  CU UGGG  AUUC ggg c
gucuua  a          uugggc    --     ---      CG  -    U     -U  -    --    -   u 

Annotation confidence Not enough data

Genome context

chr16: 15641487-15641631 [-]

Mature cfa-miR-8855

• Accession: MIMAT0034350
• Description: Canis familiaris cfa-miR-8855 mature miRNA
• Sequence: 81 - CUUAGGGUUCUGUGUUUCCUGUGGC - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545