Stem-loop cfa-mir-8847

Accession

MI0027936

Description

Canis familiaris cfa-mir-8847 precursor miRNA

Sequence

gaagcugguucuacccugacguccuguggcuccgaggugggcagcaccauuccugggcUCCCAGAGCCUGCAGGUUcagugcguggccuccagaacucucc
....((((..(((((((((...((((((((((.....((((.(((.(((....))))))))))))))).))))).)))).).))))...))))........

Structure

----gaag    -uu    - -    cgu     -     cgagg    c   a   u 
        cugg   cuac c cuga   ccugu ggcuc     uggg agc cca u
        ||||   |||| | ||||   ||||| |||||     |||| ||| |||  
        gacc   ggug g gacU   GGACG CCGAG     ACCC Ucg ggu c
ccucucaa    ucc    c u    --U     U     -----    -   -   c 

Annotation confidence Not enough data

Genome context

chr16: 12928966-12929066 [+]

Mature cfa-miR-8847

• Accession: MIMAT0034342
• Description: Canis familiaris cfa-miR-8847 mature miRNA
• Sequence: 59 - UCCCAGAGCCUGCAGGUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545