Stem-loop cfa-mir-8836

Accession

MI0027922

Description

Canis familiaris cfa-mir-8836 precursor miRNA

Sequence

caacagcagugggaauggagucacaggaagaaugaaagauAGGAAAGGAGAAGGGCCACAguaccuggcuuugcugugcccucucagcuucucuuggauugcuuucacucucauccucaucuauugguccccacu
.......((((((((((((.....(((((((.((((((.(((...(((((((((((.((((((........))))))))))).......))))))...))))))))).)))..))))..))))))....))))))

Structure

caacagc      ----      gucac    --   a      a   GAA      -------     C      ccu 
       aguggg    aaugga     agga  aga ugaaag uAG   AGGAGA       AGGGC ACAgua   g
       ||||||    ||||||     ||||  ||| |||||| |||   ||||||       ||||| ||||||    
       ucaccc    uuaucu     uccu  ucu acuuuc guu   uucucu       ucccg ugucgu   g
-------      cugg      ---ac    ac   c      -   agg      ucgacuc     -      uuc 

Annotation confidence Not enough data

Genome context

chr13: 9751650-9751784 [+]

Mature cfa-miR-8836

• Accession: MIMAT0034329
• Description: Canis familiaris cfa-miR-8836 mature miRNA
• Sequence: 41 - AGGAAAGGAGAAGGGCCACA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545