Stem-loop cfa-mir-8829

Accession

MI0027913

Description

Canis lupus familiaris cfa-mir-8829 precursor miRNA

Sequence

878 reads, 2.0 reads per million, 66 experiments

aagucuggaugguuuuccagaguguuucucUUGGCCUCUGUUCCAUGCCUGGGCUgugccuggccaguggguagagccgcaugguguaggggccacaaggaacauuccuggcagugcccuggaug
..((((((..(((.(((((((((((((((..(((((((((..((((((...((((.((((((.....)))))).))))))))))..)))))))))..))))))))).)))).)).))))))))).

Structure

aa      au   u  -    -         cU         UU      CUG    g      g 
  gucugg  ggu uu ccag aguguuucu  UGGCCUCUG  CCAUGC   GGCU ugccug c
  ||||||  ||| || |||| |||||||||  |||||||||  ||||||   |||| |||||| c
  uagguc  ccg ga gguc uuacaagga  accggggau  gguacg   ccga augggu a
-g      --   u  c    c         ac         gu      ---    g      g 

Annotation confidence Not enough data

Genome context

10: 23991315-23991439 [+]

Mature cfa-miR-8829-5p

• Accession: MIMAT0034322
• Description: Canis lupus familiaris cfa-miR-8829-5p mature miRNA
• Sequence: 31 - UUGGCCUCUGUUCCAUGCCUGGGCU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545