miRBase entry: cfa-mir-8824

Stem-loop cfa-mir-8824


Accession
MI0027905
Description
Canis lupus familiaris cfa-mir-8824 precursor miRNA


Sequence

75 reads, 4.0 reads per million, 14 experiments
gcuuugaacuaaagugugaguuuggggcuuuauuccacuucugguggugguagggugcuggcaguuuagguaacaauGUUUCCAUCUCCACCCCCGGCAguguauaugauccgccugggcacgcuggaacaggaggcca
(((((.......((((((...((.((((.((((..((((.((((.(((((..(((((..(((((((.....)))..))))..)))))))))).)))).))))...))))...)))).)))))))).......)))))..

Structure
--     gaacuaa      agu  g    --u    -uc    u    u     ua     cu    --   u 
  gcuuu       agugug   uu gggc   uuau   cacu cugg ggugg  gggug  ggca  guu a
  |||||       ||||||   || ||||   ||||   |||| |||| |||||  |||||  ||||  ||| g
  cggag       ucgcac   gg uccg   agua   gugA GGCC CCACC  UCUAC  UUGu  caa g
ac     gacaagg      ---  g    ccu    uau    C    C     --     CU    aa   u 


Annotation confidence Not enough data
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Genome context
25: 19161773-19161911 [-]

Database links

Mature cfa-miR-8824-3p

Accession MIMAT0034314
Description Canis lupus familiaris cfa-miR-8824-3p mature miRNA
Sequence 78 - GUUUCCAUCUCCACCCCCGGCA - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545