Stem-loop cfa-mir-8824

Accession

MI0027905

Description

Canis familiaris cfa-mir-8824 precursor miRNA

Sequence

gcuuugaacuaaagugugaguuuggggcuuuauuccacuucugguggugguagggugcuggcaguuuagguaacaauGUUUCCAUCUCCACCCCCGGCAguguauaugauccgccugggcacgcuggaacaggaggcca
(((((.......((((((...((.((((.((((..((((.((((.(((((..(((((..(((((((.....)))..))))..)))))))))).)))).))))...))))...)))).)))))))).......)))))..

Structure

--     gaacuaa      agu  g    --u    -uc    u    u     ua     cu    --   u 
  gcuuu       agugug   uu gggc   uuau   cacu cugg ggugg  gggug  ggca  guu a
  |||||       ||||||   || ||||   ||||   |||| |||| |||||  |||||  ||||  ||| g
  cggag       ucgcac   gg uccg   agua   gugA GGCC CCACC  UCUAC  UUGu  caa g
ac     gacaagg      ---  g    ccu    uau    C    C     --     CU    aa   u 

Annotation confidence Not enough data

Genome context

chr25: 19022858-19022996 [-]

Mature cfa-miR-8824

• Accession: MIMAT0034314
• Description: Canis familiaris cfa-miR-8824 mature miRNA
• Sequence: 78 - GUUUCCAUCUCCACCCCCGGCA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545