Stem-loop cfa-mir-8818

Accession

MI0027899

Description

Canis familiaris cfa-mir-8818 precursor miRNA

Sequence

acagcaaacgggcucagagcugagggugcgUGCCUUUCCCUGGGAGACCUUCCUGuccuuagaggaaagcgggaaucccacaggggugugggugcuggagucccccaccugggagccugugcgga
...((..((((((((..((.((.(((.((((((((.((((((((.((..((((((((((...)))...))))))))))).))))))...))))))....)).))))).))..))))))))))...

Structure

aca  aa        ag  c  a   u  ----      --U      -  A  CC       ---   u 
   gc  acgggcuc  ag ug ggg gc    gUGCCU   UCCCUG GG GA  UUCCUGu   ccu  
   ||  ||||||||  || || ||| ||    ||||||   |||||| || ||  |||||||   ||| a
   cg  uguccgag  uc ac ccc ug    cguggg   ggggac cc cu  aagggcg   gga  
agg  --        gg  c  -   c  aggu      ugu      a  -  --       aaa   g 

Annotation confidence Not enough data

Genome context

chr28: 41168746-41168870 [+]

Mature cfa-miR-8818

• Accession: MIMAT0034308
• Description: Canis familiaris cfa-miR-8818 mature miRNA
• Sequence: 31 - UGCCUUUCCCUGGGAGACCUUCCUG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545