Stem-loop cfa-mir-8815-1

Accession

MI0027895

Description

Canis familiaris cfa-mir-8815-1 precursor miRNA

Sequence

gcgcugggccaagcuccccacagcugacuucugcuUGCCAGUGGCCUGCGGGGGACGGuggcaccacgagccucuccucagcagaaggcggcuggcaggcccggcagccugugggccuuacugcugugcgu
((((..(((.(((...((((((((((.((...((((((((((.((((((.(((((.((.(((.......)))))))))).))...)))).))))))))))..))))).))))))).)))...)))..))))

Structure

    ug   --c   cuc       -   a  ucu          G    ---  G     C  u   ac 
gcgc  ggc   aag   cccacag cug cu   gcuUGCCAGU GCCU   GC GGGGA GG ggc  c
||||  |||   |||   ||||||| ||| ||   |||||||||| ||||   || ||||| || |||  a
ugcg  ucg   uuc   ggguguc gac gg   cggacggucg cgga   cg cuccu cu ccg  c
    ug   uca   --c       c   -  -cc          g    aga  a     -  -   ag 

Annotation confidence Not enough data

Genome context

chr28: 4705462-4705592 [+]

Mature cfa-miR-8815

• Accession: MIMAT0034305
• Description: Canis familiaris cfa-miR-8815 mature miRNA
• Sequence: 36 - UGCCAGUGGCCUGCGGGGGACGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545