miRBase entry: gra-MIR8784

Stem-loop gra-MIR8784


Accession
MI0027831
Description
Gossypium raimondii gra-MIR8784 precursor miRNA


Sequence

386 reads, 69.0 reads per million, 13 experiments
uagacgaccuUUUGUCGACAUGUCAGGAAAGCGCgccaaacuggaagcguuuuuuaaaaauucucaaaaaaaaaacAUCUAGUUGGGCGCGCUUUCcuuugacaugucagcaaaagcucaucca
..((.((.(((((((.(((((((((((((((((((((.(((((((...(((((((..............))))))).))))))).))))))))))))..))))))))).))))))).)).))..

Structure
ua  c  c       C         --            a       agc       aaaaau 
  ga ga cuUUUGU GACAUGUCA  GGAAAGCGCgcc aacugga   guuuuuu      u
  || || ||||||| |||||||||  |||||||||||| |||||||   |||||||       
  cu cu gaaaacg cuguacagu  cCUUUCGCGCGG UUGAUCU   caaaaaa      c
ac  a  c       a         uu            G       --A       aaaacu 


Annotation confidence Low
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Genome context
chr8: 1308896-1309019 [+]

Database links

Mature gra-miR8784-5p

Accession MIMAT0034236
Description Gossypium raimondii gra-miR8784-5p mature miRNA
Sequence 11 - UUUGUCGACAUGUCAGGAAAGCGC - 34
Evidence experimental
Illumina [1]

Mature gra-miR8784-3p

Accession MIMAT0055536
Description Gossypium raimondii gra-miR8784-3p mature miRNA
Sequence 77 - AUCUAGUUGGGCGCGCUUUC - 96
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629