miRBase entry: gra-MIR7486c

Stem-loop gra-MIR7486c


Accession
MI0027830
Description
Gossypium raimondii gra-MIR7486c precursor miRNA


Sequence

236 reads, 45.0 reads per million, 13 experiments
aaugaagcgcUUUGUCCACGUGAACAGAAAACGCuuccuugagggagcgcuuuaugucCACGUGGACAAAGUACUUccuc
...((((.((((((((((((((.(((.(((.(((((((....))))))).))).))).)))))))))))))).))))...

Structure
aau    c              A   G   A       u 
   gaag gcUUUGUCCACGUG ACA AAA CGCuucc u
   |||| |||||||||||||| ||| ||| |||||||  
   cUUC UGAAACAGGUGCAC ugu uuu gcgaggg g
cuc    A              c   a   c       a 


Annotation confidence Low
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Genome context
chr8: 53809141-53809220 [-]

Database links

Mature gra-miR7486c-5p

Accession MIMAT0034235
Description Gossypium raimondii gra-miR7486c-5p mature miRNA
Sequence 11 - UUUGUCCACGUGAACAGAAAACGC - 34
Evidence experimental
Illumina [1]

Mature gra-miR7486c-3p

Accession MIMAT0055535
Description Gossypium raimondii gra-miR7486c-3p mature miRNA
Sequence 59 - CACGUGGACAAAGUACUU - 76
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629