Stem-loop gra-MIR7504l

Accession

MI0027821

Description

Gossypium raimondii gra-MIR7504l precursor miRNA

Sequence

129 reads, 36.0 reads per million, 10 experiments

aaucauauuuUUUCUCCUGAUUUUUAGCAUUUUUagaaggaaaaagcuaaaaAUUAGGAGGAAAAAUUUGAUUU
(((((.((((((((((((((((((((((.(((((.....))))).)))))))))))))))))))))).))))).

Structure

-     u                      A     a 
 aauca auuuUUUCUCCUGAUUUUUAGC UUUUU g
 ||||| |||||||||||||||||||||| ||||| a
 UUAGU UAAAAAGGAGGAUUAaaaaucg aaaag a
U     U                      a     g 

Annotation confidence Low

Genome context

chr1: 40460049-40460122 [-]

Mature gra-miR7504l-5p

• Accession: MIMAT0034226
• Description: Gossypium raimondii gra-miR7504l-5p mature miRNA
• Sequence: 11 - UUUCUCCUGAUUUUUAGCAUUUUU - 34
• Evidence: experimental ; Illumina [1]

Mature gra-miR7504l-3p

• Accession: MIMAT0055529
• Description: Gossypium raimondii gra-miR7504l-3p mature miRNA
• Sequence: 53 - AUUAGGAGGAAAAAUUUGAUUU - 74
• Evidence: experimental ; unknown

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629