miRBase entry: gra-MIR8764

Stem-loop gra-MIR8764


Accession
MI0027793
Description
Gossypium raimondii gra-MIR8764 precursor miRNA


Sequence

738 reads, 152.0 reads per million, 13 experiments
guacuaagggUUAGAUUGCAUUUUACCCCUUuuacugaaaaacaugggccgguuugcucuuugauuuugUAUAGGGACUAAUUUGCUCuuuuuuuaaguaaaggggcaaaaugcaaucaaacuuaguaca
((((((((.....(((((((((((.(((((((.(((((((((...((((.((((.(((((.((......)).)))).).)))).)))).)))))).)))))))))).)))))))))))...)))))))).

Structure
-        ggUUA           A       u   -      cau    c    u -    u  au 
 guacuaag     GAUUGCAUUUU CCCCUUu acu gaaaaa   gggc gguu g cucu ug  u
 ||||||||     ||||||||||| ||||||| ||| ||||||   |||| |||| | |||| ||   
 caugauuc     cuaacguaaaa ggggaaa uga uuuuuu   CUCG UUAA C GGGA AU  u
a        --aaa           c       -   a      --u    U    U A    U  gu 


Annotation confidence Low
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Genome context
chr12: 33216943-33217072 [-]

Database links

Mature gra-miR8764-5p

Accession MIMAT0034198
Description Gossypium raimondii gra-miR8764-5p mature miRNA
Sequence 11 - UUAGAUUGCAUUUUACCCCUU - 31
Evidence experimental
Illumina [1]

Mature gra-miR8764-3p

Accession MIMAT0055509
Description Gossypium raimondii gra-miR8764-3p mature miRNA
Sequence 70 - UAUAGGGACUAAUUUGCUC - 88
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629